Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl diphosphate synthase type ii | B0O44_101158 | Not Available | Negative | 214183 - 215157 | 36511.0 |
| ribonuclease r | B0O44_101159 | Not Available | Negative | 215199 - 217331 | 81000.9 |
| mechanosensitive ion channel-like protein | B0O44_101160 | Not Available | Positive | 217472 - 218353 | 33595.0 |
| peptide/nickel transport system atp-binding protein | B0O44_101161 | Not Available | Negative | 218348 - 220054 | 63887.9 |
| hypothetical protein | B0O44_101162 | Not Available | Positive | 220117 - 221430 | 49057.7 |
| iron complex outermembrane receptor protein | B0O44_101163 | Not Available | Negative | 221495 - 223900 | 87262.3 |
| dna-binding transcriptional arsr family regulator | B0O44_101164 | Not Available | Positive | 224079 - 224375 | 11357.7 |
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | B0O44_101165 | Not Available | Positive | 224383 - 225486 | 40603.2 |
| acetyltransferase (gnat) family protein | B0O44_101166 | Not Available | Negative | 225552 - 225995 | 17032.5 |
| hypothetical protein | B0O44_101167 | Not Available | Negative | 226045 - 226536 | 18511.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

