Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-like camp-binding protein | B0O44_102677 | Not Available | Positive | 1853447 - 1854073 | 24374.5 |
| arac-like dna-binding protein | B0O44_102678 | Not Available | Positive | 1854337 - 1855326 | 38043.0 |
| methylamine utilization protein maue | B0O44_102679 | Not Available | Positive | 1855516 - 1856001 | 18120.0 |
| hypothetical protein | B0O44_102680 | Not Available | Positive | 1856103 - 1856363 | 9306.02 |
| hypothetical protein | B0O44_102681 | Not Available | Positive | 1856418 - 1857470 | 40326.9 |
| thiol-disulfide isomerase/thioredoxin | B0O44_102682 | Not Available | Negative | 1857475 - 1858824 | 50720.2 |
| susd-like starch-binding protein associating with outer membrane | B0O44_102683 | Not Available | Negative | 1858848 - 1860278 | 54004.9 |
| tonb-linked susc/raga family outer membrane protein | B0O44_102684 | Not Available | Negative | 1860292 - 1863603 | 121799.0 |
| fecr family protein | B0O44_102685 | Not Available | Negative | 1863713 - 1864828 | 41620.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_102686 | Not Available | Negative | 1864910 - 1865467 | 21730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

