Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-3 oxidase | B0O44_102667 | Not Available | Negative | 1844064 - 1845230 | 44156.1 |
| site-specific recombinase xerd | B0O44_102668 | Not Available | Positive | 1845438 - 1846511 | 41293.9 |
| hypothetical protein | B0O44_102669 | Not Available | Positive | 1846513 - 1847448 | 36060.6 |
| alpa family transcriptional regulator | B0O44_102670 | Not Available | Positive | 1847582 - 1847935 | 13180.1 |
| hypothetical protein | B0O44_102671 | Not Available | Positive | 1847947 - 1849140 | 46687.3 |
| chc2-type zinc finger protein | B0O44_102672 | Not Available | Positive | 1849375 - 1850256 | 33272.6 |
| mobilization protein mobc | B0O44_102673 | Not Available | Positive | 1850514 - 1850891 | 14078.2 |
| relaxase/mobilization nuclease-like protein | B0O44_102674 | Not Available | Positive | 1850881 - 1851855 | 36836.1 |
| hypothetical protein | B0O44_102675 | Not Available | Positive | 1851887 - 1852483 | 22735.3 |
| broad specificity phosphatase phoe | B0O44_102676 | Not Available | Negative | 1852521 - 1853159 | 24374.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

