Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate import-associated zinc metallohydrolase lipoprotein | B0O44_102647 | Not Available | Positive | 1823083 - 1824429 | 49941.2 |
| uncharacterized protein duf4302 | B0O44_102648 | Not Available | Positive | 1824461 - 1825735 | 45768.1 |
| hypothetical protein | B0O44_102649 | Not Available | Positive | 1825759 - 1826478 | 27024.9 |
| hypothetical protein | B0O44_102650 | Not Available | Positive | 1826659 - 1826910 | 9191.51 |
| uncharacterized protein (tigr02453 family) | B0O44_102651 | Not Available | Positive | 1826903 - 1827565 | 25762.9 |
| chemotaxis protein motb | B0O44_102652 | Not Available | Positive | 1827590 - 1828432 | 31348.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | B0O44_102653 | Not Available | Negative | 1828495 - 1829049 | 21028.8 |
| uncharacterized protein duf4286 | B0O44_102654 | Not Available | Negative | 1829057 - 1829359 | 11703.0 |
| tetratricopeptide repeat protein | B0O44_102655 | Not Available | Negative | 1829380 - 1831188 | 69049.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | B0O44_102656 | Not Available | Positive | 1831364 - 1833247 | 71791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

