Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | B0O44_102637 | Not Available | Positive | 1812136 - 1813038 | 33497.0 |
| cytochrome c oxidase subunit 3 | B0O44_102638 | Not Available | Positive | 1813047 - 1813625 | 21577.5 |
| cytochrome c oxidase subunit 3 | B0O44_102639 | Not Available | Positive | 1813656 - 1814378 | 27347.5 |
| caa(3)-type oxidase subunit iv | B0O44_102640 | Not Available | Positive | 1814397 - 1814753 | 13497.1 |
| protein sco1/2 | B0O44_102641 | Not Available | Positive | 1814755 - 1815459 | 26668.2 |
| putative membrane protein | B0O44_102642 | Not Available | Positive | 1815472 - 1816050 | 21952.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_102643 | Not Available | Positive | 1816196 - 1816813 | 24016.0 |
| fecr family protein | B0O44_102644 | Not Available | Positive | 1816930 - 1817898 | 36385.9 |
| tonb-linked susc/raga family outer membrane protein | B0O44_102645 | Not Available | Positive | 1817934 - 1821584 | 135669.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_102646 | Not Available | Positive | 1821595 - 1823064 | 54275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

