Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homospermidine synthase (spermidine-specific) | B0O44_102627 | Not Available | Positive | 1798316 - 1799293 | 36816.1 |
| cytochrome c | B0O44_102628 | Not Available | Positive | 1799545 - 1800837 | 47685.0 |
| molybdopterin-containing oxidoreductase family iron-sulfur binding subunit | B0O44_102629 | Not Available | Positive | 1800892 - 1803921 | 111508.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | B0O44_102630 | Not Available | Positive | 1803945 - 1805417 | 55814.4 |
| uncharacterized protein duf3341 | B0O44_102631 | Not Available | Positive | 1805420 - 1805956 | 20028.4 |
| cbb3-type cytochrome c oxidase subunit iii | B0O44_102632 | Not Available | Positive | 1805928 - 1806533 | 22132.5 |
| hypothetical protein | B0O44_102633 | Not Available | Positive | 1806548 - 1807762 | 45952.1 |
| cytochrome c oxidase subunit 2 | B0O44_102634 | Not Available | Positive | 1807861 - 1809075 | 45228.1 |
| cytochrome c oxidase subunit 1 | B0O44_102635 | Not Available | Positive | 1809096 - 1810982 | 70762.0 |
| cytochrome c oxidase assembly protein subunit 15 | B0O44_102636 | Not Available | Positive | 1811063 - 1812121 | 39664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

