Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | B0O44_102617 | Not Available | Positive | 1787122 - 1788426 | 46629.7 |
| hypothetical protein | B0O44_102618 | Not Available | Positive | 1788495 - 1788998 | 17362.2 |
| peptide chain release factor 2 | B0O44_102619 | Not Available | Positive | 1789298 - 1790140 | 31912.8 |
| transglutaminase superfamily protein | B0O44_102620 | Not Available | Negative | 1790184 - 1791053 | 33653.0 |
| putative o-methyltransferase yrrm | B0O44_102621 | Not Available | Positive | 1791094 - 1791876 | 29909.1 |
| putative transcriptional regulator | B0O44_102622 | Not Available | Positive | 1791983 - 1792348 | 13961.8 |
| blar1 peptidase m56 | B0O44_102623 | Not Available | Positive | 1792348 - 1794330 | 75461.0 |
| hypothetical protein | B0O44_102624 | Not Available | Negative | 1794327 - 1795457 | 42463.7 |
| phosphoglycerol transferase mdob-like alkp superfamily enzyme | B0O44_102625 | Not Available | Positive | 1795589 - 1797544 | 73849.1 |
| dna-binding response ompr family regulator | B0O44_102626 | Not Available | Positive | 1797564 - 1798253 | 26100.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

