Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | B0O44_102597 | Not Available | Negative | 1757693 - 1758661 | 35542.8 |
| arginase family enzyme | B0O44_102598 | Not Available | Positive | 1758735 - 1759916 | 44886.9 |
| peroxiredoxin | B0O44_102599 | Not Available | Positive | 1760002 - 1761141 | 41651.9 |
| peroxiredoxin | B0O44_102600 | Not Available | Positive | 1761316 - 1762455 | 42387.2 |
| non-ribosomal peptide synthetase-like protein | B0O44_102601 | Not Available | Negative | 1762525 - 1766466 | 144926.0 |
| nuclease a inhibitor-like protein | B0O44_102602 | Not Available | Positive | 1766744 - 1767145 | 14738.3 |
| endonuclease g | B0O44_102603 | Not Available | Positive | 1767169 - 1768551 | 48455.7 |
| phosphoribosylamine--glycine ligase | B0O44_102604 | Not Available | Negative | 1768617 - 1769888 | 45761.1 |
| preprotein translocase subunit seca | B0O44_102605 | Not Available | Positive | 1770095 - 1773403 | 124415.0 |
| sporulation related protein | B0O44_102606 | Not Available | Positive | 1773433 - 1773933 | 19100.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

