Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase superfamily protein | B0O44_102577 | Not Available | Positive | 1730391 - 1731032 | 24865.2 |
| lipoyl(octanoyl) transferase | B0O44_102578 | Not Available | Positive | 1731044 - 1731745 | 26894.2 |
| lysophospholipase l1-like esterase | B0O44_102579 | Not Available | Positive | 1731785 - 1732501 | 25328.3 |
| l-serine dehydratase | B0O44_102580 | Not Available | Negative | 1732503 - 1733930 | 51534.6 |
| putative mg2+ transporter-c (mgtc) family protein | B0O44_102581 | Not Available | Negative | 1734023 - 1734688 | 24462.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_102582 | Not Available | Negative | 1734724 - 1735758 | 37927.6 |
| pkd repeat protein | B0O44_102583 | Not Available | Negative | 1735764 - 1741715 | 209936.0 |
| chaperonin groel | B0O44_102584 | Not Available | Negative | 1741852 - 1743495 | 57751.5 |
| chaperonin groes | B0O44_102585 | Not Available | Negative | 1743560 - 1743853 | 10328.4 |
| preprotein translocase subunit secg | B0O44_102586 | Not Available | Negative | 1744073 - 1744423 | 11978.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

