Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase subunit a | B0O44_102557 | Not Available | Positive | 1707794 - 1709773 | 73402.3 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | B0O44_102558 | Not Available | Positive | 1709792 - 1710562 | 27783.2 |
| tonb family protein | B0O44_102559 | Not Available | Negative | 1710650 - 1712269 | 60264.4 |
| putative transcriptional regulator | B0O44_102560 | Not Available | Negative | 1712266 - 1712700 | 17120.8 |
| hypothetical protein | B0O44_102561 | Not Available | Negative | 1712834 - 1713613 | 29589.0 |
| abc-2 type transport system atp-binding protein | B0O44_102562 | Not Available | Negative | 1713615 - 1714526 | 33233.4 |
| hypothetical protein | B0O44_102563 | Not Available | Negative | 1714528 - 1714779 | 9263.41 |
| histidine kinase | B0O44_102564 | Not Available | Positive | 1715063 - 1716097 | 39726.8 |
| lyttr family two component transcriptional regulator | B0O44_102565 | Not Available | Positive | 1716200 - 1716946 | 28239.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | B0O44_102566 | Not Available | Negative | 1716960 - 1717694 | 27983.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

