Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101138 | Not Available | Positive | 193580 - 194428 | 30719.2 |
| zn-dependent m28 family amino/carboxypeptidase | B0O44_101139 | Not Available | Positive | 194596 - 196257 | 60795.7 |
| hypothetical protein | B0O44_101140 | Not Available | Positive | 196301 - 197077 | 29290.0 |
| polygalacturonase | B0O44_101141 | Not Available | Positive | 197165 - 199996 | 104576.0 |
| uncharacterized protein (tigr00290 family) | B0O44_101142 | Not Available | Positive | 200033 - 200740 | 26567.0 |
| acetyl-coa carboxylase carboxyltransferase component | B0O44_101143 | Not Available | Positive | 200783 - 202411 | 58931.1 |
| hypothetical protein | B0O44_101144 | Not Available | Positive | 202428 - 203030 | 22469.8 |
| thioredoxin reductase (nadph) | B0O44_101145 | Not Available | Positive | 203153 - 204115 | 34492.9 |
| hypothetical protein | B0O44_101146 | Not Available | Negative | 204429 - 204707 | 10517.9 |
| hexosaminidase | B0O44_101147 | Not Available | Positive | 204726 - 206666 | 71847.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

