Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf3127 | B0O44_102547 | Not Available | Positive | 1695818 - 1696180 | 13476.8 |
| dha1 family tetracycline resistance protein-like mfs transporter | B0O44_102548 | Not Available | Negative | 1696432 - 1697655 | 44417.4 |
| putative atpase | B0O44_102549 | Not Available | Positive | 1697705 - 1698292 | 22418.3 |
| two-component system phosphate regulon sensor histidine kinase phor | B0O44_102550 | Not Available | Positive | 1698330 - 1700177 | 70600.2 |
| dna-binding response ompr family regulator | B0O44_102551 | Not Available | Positive | 1700197 - 1700898 | 26900.9 |
| helicase-like protein | B0O44_102552 | Not Available | Positive | 1701018 - 1703288 | 86512.3 |
| diaminopimelate epimerase | B0O44_102553 | Not Available | Negative | 1703285 - 1704094 | 29946.4 |
| do/deqq family serine protease | B0O44_102554 | Not Available | Positive | 1704344 - 1705873 | 53244.7 |
| thioredoxin-like protein | B0O44_102555 | Not Available | Negative | 1705936 - 1706952 | 38461.1 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | B0O44_102556 | Not Available | Positive | 1707086 - 1707766 | 24967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

