Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily ii dna/rna helicase | B0O44_102537 | Not Available | Negative | 1684227 - 1685435 | 44911.9 |
| uncharacterized protein duf4197 | B0O44_102538 | Not Available | Negative | 1685553 - 1686311 | 27095.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_102539 | Not Available | Positive | 1686453 - 1687031 | 22631.5 |
| carboxypeptidase-like protein | B0O44_102540 | Not Available | Positive | 1687024 - 1688319 | 47368.9 |
| pit family inorganic phosphate transporter | B0O44_102541 | Not Available | Negative | 1688398 - 1689408 | 35866.8 |
| hypothetical protein | B0O44_102542 | Not Available | Negative | 1689420 - 1690061 | 24092.9 |
| two-component system phosphate regulon sensor histidine kinase phor | B0O44_102543 | Not Available | Negative | 1690235 - 1691260 | 39468.9 |
| phospholipase c | B0O44_102544 | Not Available | Negative | 1691361 - 1693742 | 88726.5 |
| uncharacterized protein | B0O44_102545 | Not Available | Negative | 1693837 - 1694493 | 24815.8 |
| putative n6-adenine-specific dna methylase | B0O44_102546 | Not Available | Negative | 1694546 - 1695745 | 44989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

