Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrr family transcriptional regulator | B0O44_102527 | Not Available | Negative | 1672757 - 1673410 | 25436.2 |
| iron complex outermembrane receptor protein | B0O44_102528 | Not Available | Positive | 1674156 - 1676492 | 86278.7 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_102529 | Not Available | Positive | 1676619 - 1677611 | 37308.5 |
| hypothetical protein | B0O44_102530 | Not Available | Negative | 1677624 - 1678391 | 28902.8 |
| putative dehydrogenase | B0O44_102531 | Not Available | Negative | 1678395 - 1679408 | 38166.7 |
| hypothetical protein | B0O44_102532 | Not Available | Positive | 1679489 - 1679842 | 13789.9 |
| outer membrane protein ompa-like peptidoglycan-associated protein | B0O44_102533 | Not Available | Negative | 1679916 - 1680596 | 23210.8 |
| abc-2 type transport system atp-binding protein | B0O44_102534 | Not Available | Negative | 1680745 - 1681443 | 26408.8 |
| hypothetical protein | B0O44_102535 | Not Available | Negative | 1681440 - 1682918 | 55506.7 |
| putative atpase | B0O44_102536 | Not Available | Negative | 1682928 - 1684208 | 47237.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

