Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endopeptidase | B0O44_102517 | Not Available | Positive | 1661503 - 1663551 | 77117.0 |
| poly-gamma-glutamate capsule biosynthesis protein capa/ywtb (metallophosphatase superfamily) | B0O44_102518 | Not Available | Negative | 1663628 - 1664782 | 42042.4 |
| lipoprotein spr | B0O44_102519 | Not Available | Negative | 1664818 - 1665372 | 20908.2 |
| pyruvate dehydrogenase e1 component alpha subunit | B0O44_102520 | Not Available | Positive | 1665693 - 1666688 | 37010.2 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | B0O44_102521 | Not Available | Positive | 1666721 - 1668367 | 57721.0 |
| histidyl-trna synthetase | B0O44_102522 | Not Available | Positive | 1668410 - 1669825 | 52299.3 |
| dienelactone hydrolase | B0O44_102523 | Not Available | Negative | 1669829 - 1670554 | 26050.0 |
| twitching motility two-component system response regulator pilg/two-component system alkaline phosphatase synthesis response regulator phop | B0O44_102524 | Not Available | Negative | 1670840 - 1671235 | 14780.0 |
| hypothetical protein | B0O44_102525 | Not Available | Positive | 1671277 - 1671420 | 5907.33 |
| phosphotransferase family enzyme | B0O44_102526 | Not Available | Negative | 1671458 - 1672756 | 49896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

