Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarase class ii | B0O44_102507 | Not Available | Positive | 1649359 - 1650756 | 49954.1 |
| hypothetical protein | B0O44_102508 | Not Available | Positive | 1650772 - 1651263 | 18847.6 |
| s1/p1 nuclease | B0O44_102509 | Not Available | Positive | 1651268 - 1652074 | 30310.4 |
| uncharacterized protein duf1543 | B0O44_102510 | Not Available | Positive | 1652085 - 1652642 | 21067.3 |
| cyanophycin synthetase | B0O44_102511 | Not Available | Negative | 1652694 - 1655309 | 96490.4 |
| cyanophycinase | B0O44_102512 | Not Available | Positive | 1655650 - 1656525 | 31238.7 |
| l-asparaginase | B0O44_102513 | Not Available | Positive | 1656544 - 1657386 | 29782.1 |
| hypothetical protein | B0O44_102514 | Not Available | Positive | 1657405 - 1658082 | 25276.3 |
| carboxyl-terminal processing protease | B0O44_102515 | Not Available | Positive | 1658214 - 1660337 | 78285.2 |
| regulator of protease activity hflc (stomatin/prohibitin superfamily) | B0O44_102516 | Not Available | Negative | 1660403 - 1661335 | 34807.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

