Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system fused atpase/permease subunit | B0O44_102497 | Not Available | Negative | 1636736 - 1638565 | 67586.6 |
| gt2 family glycosyltransferase | B0O44_102498 | Not Available | Negative | 1638623 - 1639609 | 38144.9 |
| hypothetical protein | B0O44_102499 | Not Available | Negative | 1639620 - 1640498 | 34615.5 |
| uncharacterized protein duf2029 | B0O44_102500 | Not Available | Negative | 1640579 - 1641775 | 46594.9 |
| glycosyl transferase-like sugar-binding protein | B0O44_102501 | Not Available | Negative | 1641808 - 1642491 | 26682.1 |
| lao/ao transport system kinase | B0O44_102502 | Not Available | Positive | 1642597 - 1643487 | 33015.2 |
| oop family ompa-ompf porin | B0O44_102503 | Not Available | Positive | 1643886 - 1645232 | 47953.3 |
| 2-iminobutanoate/2-iminopropanoate deaminase | B0O44_102504 | Not Available | Positive | 1645491 - 1645880 | 14032.8 |
| atp-dependent dna helicase recg | B0O44_102505 | Not Available | Positive | 1645902 - 1648007 | 80121.5 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_102506 | Not Available | Negative | 1648008 - 1649219 | 45959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

