Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadr type nicotinamide-nucleotide adenylyltransferase | B0O44_102467 | Not Available | Negative | 1602930 - 1603463 | 20360.6 |
| nicotinamide mononucleotide transporter | B0O44_102468 | Not Available | Negative | 1603447 - 1604103 | 25434.3 |
| hypothetical protein | B0O44_102469 | Not Available | Positive | 1604561 - 1604881 | 11655.3 |
| carbamoyl-phosphate synthase large subunit | B0O44_102470 | Not Available | Positive | 1605049 - 1607865 | 104339.0 |
| dna repair protein rada/sms | B0O44_102471 | Not Available | Negative | 1608179 - 1609555 | 50406.7 |
| ribonuclease g | B0O44_102472 | Not Available | Negative | 1609680 - 1611230 | 58697.4 |
| cytochrome c-type biogenesis protein ccmh/nrfg | B0O44_102473 | Not Available | Negative | 1611495 - 1612355 | 30837.5 |
| dna-binding protein hu-beta | B0O44_102474 | Not Available | Negative | 1612360 - 1612662 | 11103.6 |
| a/g-specific dna-adenine glycosylase | B0O44_102475 | Not Available | Positive | 1612833 - 1613882 | 40656.0 |
| single-strand binding protein | B0O44_102476 | Not Available | Positive | 1613894 - 1614328 | 16013.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

