Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | B0O44_102456 | Not Available | Positive | 1590177 - 1591013 | 30115.9 |
| putative zn-dependent peptidase | B0O44_102457 | Not Available | Negative | 1591070 - 1592356 | 48460.2 |
| putative zn-dependent peptidase | B0O44_102458 | Not Available | Negative | 1592364 - 1593731 | 52764.6 |
| n-acetylglucosamine-6-phosphate deacetylase | B0O44_102459 | Not Available | Positive | 1593885 - 1595003 | 40641.0 |
| uridylate kinase | B0O44_102460 | Not Available | Positive | 1595072 - 1595734 | 24088.3 |
| ribosome recycling factor | B0O44_102461 | Not Available | Positive | 1595775 - 1596338 | 20877.4 |
| atp-binding cassette subfamily b protein | B0O44_102462 | Not Available | Positive | 1596468 - 1598219 | 65726.2 |
| transmembrane secretion effector | B0O44_102463 | Not Available | Negative | 1598241 - 1599563 | 48536.7 |
| thiamine-phosphate pyrophosphorylase | B0O44_102464 | Not Available | Negative | 1599628 - 1600263 | 23366.0 |
| iron complex outermembrane receptor protein | B0O44_102465 | Not Available | Negative | 1600275 - 1602716 | 90981.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

