Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101128 | Not Available | Positive | 184788 - 185153 | 13765.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | B0O44_101129 | Not Available | Positive | 185092 - 185616 | 20552.0 |
| type iv pilus assembly protein pilc | B0O44_101130 | Not Available | Positive | 185618 - 186757 | 43236.9 |
| hypothetical protein | B0O44_101131 | Not Available | Positive | 186798 - 187136 | 12922.2 |
| type iv pilus assembly protein pile | B0O44_101132 | Not Available | Positive | 187374 - 187814 | 16197.7 |
| hypothetical protein | B0O44_101133 | Not Available | Positive | 187814 - 188344 | 20671.0 |
| general secretion pathway protein e/type iv pilus assembly protein pilb | B0O44_101134 | Not Available | Positive | 188355 - 189785 | 53831.9 |
| type iv pilus assembly protein pilq | B0O44_101135 | Not Available | Positive | 189785 - 191743 | 71681.4 |
| hypothetical protein | B0O44_101136 | Not Available | Positive | 191745 - 192959 | 45827.4 |
| hypothetical protein | B0O44_101137 | Not Available | Positive | 192961 - 193515 | 21086.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

