Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphokinase | B0O44_102436 | Not Available | Positive | 1571258 - 1571821 | 21473.6 |
| ribosomal protein s18 acetylase rimi-like enzyme | B0O44_102437 | Not Available | Positive | 1571818 - 1572318 | 19000.0 |
| tricorn protease | B0O44_102438 | Not Available | Negative | 1572315 - 1575590 | 122218.0 |
| peptidase m28-like protein | B0O44_102439 | Not Available | Negative | 1575605 - 1576918 | 48585.3 |
| uncharacterized protein duf4407 | B0O44_102440 | Not Available | Negative | 1576957 - 1578084 | 42653.3 |
| rhodanese-related sulfurtransferase | B0O44_102441 | Not Available | Positive | 1578244 - 1578561 | 11914.3 |
| hypothetical protein | B0O44_102442 | Not Available | Positive | 1578563 - 1578763 | 7782.71 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | B0O44_102443 | Not Available | Negative | 1578738 - 1579772 | 38244.4 |
| hypothetical protein | B0O44_102444 | Not Available | Positive | 1579957 - 1580925 | 37107.6 |
| membrane associated rhomboid family serine protease | B0O44_102445 | Not Available | Negative | 1580918 - 1581544 | 23582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

