Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster biogenesis protein nfua | B0O44_102386 | Not Available | Positive | 1512745 - 1512990 | 8692.71 |
| hypothetical protein | B0O44_102387 | Not Available | Positive | 1513046 - 1513684 | 23855.7 |
| peptide deformylase | B0O44_102388 | Not Available | Negative | 1513691 - 1514251 | 21345.8 |
| putative zn-dependent peptidase | B0O44_102389 | Not Available | Negative | 1514270 - 1515499 | 46159.3 |
| hypothetical protein | B0O44_102390 | Not Available | Negative | 1515536 - 1516723 | 43999.9 |
| putative membrane protein duf2157 | B0O44_102391 | Not Available | Negative | 1516720 - 1517703 | 37300.6 |
| hypothetical protein | B0O44_102392 | Not Available | Negative | 1517743 - 1519371 | 61677.9 |
| abc-2 type transport system atp-binding protein | B0O44_102393 | Not Available | Negative | 1519429 - 1520199 | 28530.7 |
| molecular chaperone htpg | B0O44_102394 | Not Available | Positive | 1520360 - 1522249 | 71632.2 |
| thiol-disulfide isomerase/thioredoxin | B0O44_102395 | Not Available | Positive | 1522450 - 1523031 | 21894.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

