Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s16 | B0O44_102376 | Not Available | Positive | 1504483 - 1505040 | 20071.6 |
| 16s rrna processing protein rimm | B0O44_102377 | Not Available | Positive | 1505131 - 1505658 | 20385.0 |
| trna (guanine37-n1)-methyltransferase | B0O44_102378 | Not Available | Positive | 1505669 - 1506346 | 25217.4 |
| hypothetical protein | B0O44_102379 | Not Available | Negative | 1506343 - 1506690 | 12810.5 |
| hypothetical protein | B0O44_102380 | Not Available | Positive | 1506817 - 1507095 | 11183.7 |
| large subunit ribosomal protein l19 | B0O44_102381 | Not Available | Positive | 1507292 - 1507639 | 13121.0 |
| phosphatidylserine decarboxylase | B0O44_102382 | Not Available | Negative | 1507965 - 1508624 | 25261.8 |
| hypoxanthine phosphoribosyltransferase | B0O44_102383 | Not Available | Negative | 1508721 - 1509263 | 20073.6 |
| transglycosylase | B0O44_102384 | Not Available | Negative | 1509273 - 1511453 | 81837.0 |
| atp-binding protein involved in chromosome partitioning | B0O44_102385 | Not Available | Positive | 1511572 - 1512648 | 38079.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

