Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_102366 | Not Available | Negative | 1494498 - 1495322 | 30315.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | B0O44_102367 | Not Available | Negative | 1495379 - 1496461 | 39850.8 |
| l-lactate dehydrogenase complex protein lldg | B0O44_102368 | Not Available | Negative | 1496526 - 1497140 | 23405.2 |
| cell division protease ftsh | B0O44_102369 | Not Available | Negative | 1497225 - 1499321 | 77248.1 |
| ribosome-associated protein | B0O44_102370 | Not Available | Negative | 1499346 - 1499720 | 14225.7 |
| bira family biotin operon repressor/biotin-[acetyl-coa-carboxylase] ligase | B0O44_102371 | Not Available | Positive | 1499765 - 1500535 | 29021.9 |
| thiol:disulfide interchange protein dsbd | B0O44_102372 | Not Available | Positive | 1500630 - 1501079 | 16739.4 |
| thiol:disulfide interchange protein dsbd | B0O44_102373 | Not Available | Positive | 1501176 - 1502876 | 62020.5 |
| 6-phosphofructokinase | B0O44_102374 | Not Available | Positive | 1502884 - 1503867 | 35128.5 |
| uncharacterized protein ybjq (upf0145 family) | B0O44_102375 | Not Available | Negative | 1503889 - 1504209 | 11044.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

