Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_102356 | Not Available | Positive | 1484365 - 1485288 | 34908.5 |
| putative signal transducing protein | B0O44_102357 | Not Available | Positive | 1485269 - 1485475 | 7587.07 |
| phosphatidate cytidylyltransferase | B0O44_102358 | Not Available | Positive | 1485487 - 1486296 | 30396.0 |
| hypothetical protein | B0O44_102359 | Not Available | Negative | 1486299 - 1486514 | 8185.27 |
| transcription-repair coupling factor | B0O44_102360 | Not Available | Negative | 1486523 - 1489864 | 126909.0 |
| uncharacterized protein duf2752 | B0O44_102361 | Not Available | Positive | 1489938 - 1490243 | 11522.6 |
| tm2 domain-containing protein | B0O44_102362 | Not Available | Positive | 1490256 - 1490621 | 14022.6 |
| dinuclear metal center ybgi/sa1388 family protein | B0O44_102363 | Not Available | Positive | 1490714 - 1491811 | 41348.5 |
| hypothetical protein | B0O44_102364 | Not Available | Positive | 1492074 - 1492820 | 28854.6 |
| tetratricopeptide repeat protein | B0O44_102365 | Not Available | Positive | 1492994 - 1494487 | 56105.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

