Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | B0O44_102346 | Not Available | Positive | 1473156 - 1474787 | 61533.3 |
| carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily) | B0O44_102347 | Not Available | Negative | 1474789 - 1475298 | 18111.8 |
| l-aspartate oxidase | B0O44_102348 | Not Available | Negative | 1475309 - 1476895 | 59389.9 |
| quinolinate synthetase | B0O44_102349 | Not Available | Positive | 1477512 - 1478510 | 36964.8 |
| thiamine-monophosphate kinase | B0O44_102350 | Not Available | Positive | 1478554 - 1479588 | 38028.7 |
| dna recombination protein rmuc | B0O44_102351 | Not Available | Negative | 1479589 - 1480896 | 50220.4 |
| glycine/d-amino acid oxidase-like deaminating enzyme | B0O44_102352 | Not Available | Negative | 1480968 - 1482113 | 42889.9 |
| hypothetical protein | B0O44_102353 | Not Available | Positive | 1482191 - 1482886 | 25834.5 |
| uncharacterized protein affecting mg2+/co2+ transport | B0O44_102354 | Not Available | Negative | 1482883 - 1483269 | 14717.3 |
| pp_01275 | B0O44_102355 | Not Available | Negative | 1483304 - 1484311 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

