Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | B0O44_102336 | Not Available | Positive | 1460620 - 1461861 | 46833.4 |
| uncharacterized protein duf2233 | B0O44_102337 | Not Available | Positive | 1461955 - 1462824 | 32421.9 |
| hypothetical protein | B0O44_102338 | Not Available | Positive | 1462851 - 1463789 | 35435.7 |
| cspa family cold shock protein | B0O44_102339 | Not Available | Positive | 1463897 - 1464088 | 6960.28 |
| glycerophosphoryl diester phosphodiesterase | B0O44_102340 | Not Available | Negative | 1464151 - 1464930 | 29782.1 |
| hypothetical protein | B0O44_102341 | Not Available | Positive | 1464980 - 1468291 | 127537.0 |
| rrna maturation rnase ybey | B0O44_102342 | Not Available | Positive | 1468303 - 1468737 | 17058.6 |
| atp-binding cassette subfamily f protein uup | B0O44_102343 | Not Available | Positive | 1468910 - 1470778 | 71143.2 |
| hypothetical protein | B0O44_102344 | Not Available | Positive | 1470832 - 1471080 | 8964.26 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | B0O44_102345 | Not Available | Positive | 1471150 - 1473012 | 69502.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

