Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | B0O44_102326 | Not Available | Negative | 1449091 - 1450503 | 51967.4 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | B0O44_102327 | Not Available | Negative | 1450493 - 1451581 | 39377.6 |
| hypothetical protein | B0O44_102328 | Not Available | Negative | 1451705 - 1452928 | 46679.8 |
| response regulator receiver domain-containing protein | B0O44_102329 | Not Available | Positive | 1453033 - 1454586 | 60545.6 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | B0O44_102330 | Not Available | Positive | 1454595 - 1455020 | 16401.6 |
| alanine dehydrogenase | B0O44_102331 | Not Available | Positive | 1455074 - 1456300 | 44384.0 |
| d-alanyl-d-alanine dipeptidase | B0O44_102332 | Not Available | Positive | 1456305 - 1456988 | 26607.7 |
| putative mfs family arabinose efflux permease | B0O44_102333 | Not Available | Negative | 1456975 - 1458156 | 42395.9 |
| 7-keto-8-aminopelargonate synthetase-like enzyme | B0O44_102334 | Not Available | Negative | 1458207 - 1459262 | 39375.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | B0O44_102335 | Not Available | Negative | 1459249 - 1460571 | 50707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

