Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | B0O44_102316 | Not Available | Negative | 1439130 - 1441487 | 89764.6 |
| hypothetical protein | B0O44_102317 | Not Available | Negative | 1441527 - 1442717 | 44185.9 |
| 4,5-dopa dioxygenase extradiol | B0O44_102318 | Not Available | Negative | 1442810 - 1443637 | 30643.2 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | B0O44_102319 | Not Available | Positive | 1443786 - 1444496 | 27057.6 |
| exodeoxyribonuclease-3 | B0O44_102320 | Not Available | Positive | 1444548 - 1445318 | 29643.3 |
| formiminoglutamase | B0O44_102321 | Not Available | Positive | 1445329 - 1446303 | 35656.8 |
| 5-formyltetrahydrofolate cyclo-ligase | B0O44_102322 | Not Available | Negative | 1446288 - 1446851 | 21440.0 |
| elongation factor p | B0O44_102323 | Not Available | Negative | 1446967 - 1447575 | 23243.7 |
| abc-type multidrug transport system atpase subunit | B0O44_102324 | Not Available | Negative | 1447680 - 1448300 | 23850.5 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | B0O44_102325 | Not Available | Negative | 1448309 - 1449094 | 28505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

