Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | B0O44_102306 | Not Available | Negative | 1423648 - 1426047 | 91507.3 |
| tetr family transcriptional regulator | B0O44_102307 | Not Available | Positive | 1426377 - 1426997 | 23653.0 |
| outer membrane protein tolc | B0O44_102308 | Not Available | Positive | 1426994 - 1428313 | 48727.5 |
| membrane fusion protein (multidrug efflux system) | B0O44_102309 | Not Available | Positive | 1428325 - 1429368 | 37463.6 |
| dha2 family multidrug resistance protein | B0O44_102310 | Not Available | Positive | 1429372 - 1430919 | 56031.4 |
| phosphoenolpyruvate carboxylase type 1 | B0O44_102311 | Not Available | Positive | 1431164 - 1433755 | 98844.1 |
| hypothetical protein | B0O44_102312 | Not Available | Negative | 1433812 - 1434954 | 41409.0 |
| outer membrane receptor protein involved in fe transport | B0O44_102313 | Not Available | Negative | 1434965 - 1437538 | 93926.3 |
| alkyl hydroperoxide reductase subunit d | B0O44_102314 | Not Available | Negative | 1437780 - 1438364 | 21389.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | B0O44_102315 | Not Available | Negative | 1438452 - 1438997 | 20741.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

