Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase/dna gyrase b/hsp90-like atpase | B0O44_102296 | Not Available | Positive | 1417857 - 1419083 | 47108.1 |
| dinb family protein | B0O44_102297 | Not Available | Positive | 1419052 - 1419558 | 19436.0 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | B0O44_102298 | Not Available | Positive | 1419597 - 1419980 | 13847.1 |
| crp-like camp-binding protein | B0O44_102299 | Not Available | Negative | 1419984 - 1420577 | 23159.4 |
| hypothetical protein | B0O44_102300 | Not Available | Positive | 1420692 - 1421048 | 12813.2 |
| quaternary ammonium compound-resistance protein suge | B0O44_102301 | Not Available | Positive | 1421103 - 1421498 | 14821.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_102302 | Not Available | Positive | 1421551 - 1422132 | 22402.9 |
| hypothetical protein | B0O44_102303 | Not Available | Positive | 1422129 - 1422614 | 18371.2 |
| hypothetical protein | B0O44_102304 | Not Available | Negative | 1422861 - 1423421 | 20687.1 |
| hypothetical protein | B0O44_102305 | Not Available | Negative | 1423427 - 1423609 | 6604.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

