Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | B0O44_102276 | Not Available | Positive | 1394401 - 1396146 | 65530.6 |
| hypothetical protein | B0O44_102277 | Not Available | Negative | 1396190 - 1396630 | 16760.6 |
| putative superfamily iii holin-x | B0O44_102278 | Not Available | Negative | 1396614 - 1396991 | 14479.7 |
| ytxh-like protein | B0O44_102279 | Not Available | Negative | 1397020 - 1397283 | 9328.88 |
| putative purr-regulated permease perm | B0O44_102280 | Not Available | Negative | 1397342 - 1398391 | 38923.2 |
| two-component system response regulator hydg | B0O44_102281 | Not Available | Negative | 1398400 - 1399803 | 52570.2 |
| enoyl-coa hydratase | B0O44_102282 | Not Available | Negative | 1399972 - 1400751 | 27287.1 |
| methylmalonyl-coa mutase c-terminal domain/subunit | B0O44_102283 | Not Available | Negative | 1400755 - 1401174 | 15107.7 |
| glutaminyl-trna synthetase | B0O44_102284 | Not Available | Positive | 1401222 - 1402916 | 65222.5 |
| n-acetyl-anhydromuramyl-l-alanine amidase ampd | B0O44_102285 | Not Available | Negative | 1402954 - 1403787 | 30858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

