Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-mn family superoxide dismutase | B0O44_102266 | Not Available | Positive | 1385311 - 1385922 | 22448.4 |
| 23s rrna (cytosine1962-c5)-methyltransferase | B0O44_102267 | Not Available | Positive | 1385995 - 1387182 | 44317.0 |
| hypothetical protein | B0O44_102268 | Not Available | Negative | 1387179 - 1387436 | 9307.73 |
| putative mfs family arabinose efflux permease | B0O44_102269 | Not Available | Negative | 1387448 - 1388980 | 56124.2 |
| putative membrane protein | B0O44_102270 | Not Available | Positive | 1389135 - 1390034 | 34594.2 |
| nucleoid associated protein ndpa | B0O44_102271 | Not Available | Negative | 1390041 - 1391096 | 41174.0 |
| putative tellurium resistance membrane protein terc | B0O44_102272 | Not Available | Negative | 1391163 - 1391915 | 27463.7 |
| hypothetical protein | B0O44_102273 | Not Available | Negative | 1391997 - 1393232 | 45219.3 |
| hypothetical protein | B0O44_102274 | Not Available | Negative | 1393229 - 1393756 | 20394.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_102275 | Not Available | Negative | 1393753 - 1394271 | 20268.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

