Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | B0O44_102256 | Not Available | Negative | 1378084 - 1378644 | 21473.9 |
| ahpd family alkylhydroperoxidase | B0O44_102257 | Not Available | Negative | 1378647 - 1378988 | 13010.7 |
| methylated-dna-protein-cysteine methyltransferase-like protein | B0O44_102258 | Not Available | Negative | 1379012 - 1379338 | 12098.9 |
| trna (guanine-n7-)-methyltransferase | B0O44_102259 | Not Available | Negative | 1379338 - 1379988 | 25088.0 |
| gdp-l-fucose synthase | B0O44_102260 | Not Available | Positive | 1380140 - 1381030 | 33486.1 |
| hypothetical protein | B0O44_102261 | Not Available | Positive | 1381133 - 1381567 | 16639.2 |
| lysr family hydrogen peroxide-inducible transcriptional activator | B0O44_102262 | Not Available | Positive | 1381629 - 1382561 | 35247.4 |
| ubiquinone biosynthesis protein | B0O44_102263 | Not Available | Negative | 1382572 - 1384224 | 62501.4 |
| pp_01184 | B0O44_102264 | Not Available | Positive | 1384386 - 1384721 | Not Available |
| trna(adenine34) deaminase | B0O44_102265 | Not Available | Positive | 1384722 - 1385192 | 17232.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

