Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase (threonine type) | B0O44_101108 | Not Available | Positive | 156950 - 157975 | 36196.7 |
| cyanophycinase | B0O44_101109 | Not Available | Positive | 157975 - 158844 | 31585.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_101110 | Not Available | Positive | 158988 - 159596 | 23372.0 |
| fecr family protein | B0O44_101111 | Not Available | Positive | 159683 - 160651 | 36276.1 |
| outer membrane receptor protein involved in fe transport | B0O44_101112 | Not Available | Positive | 160780 - 163974 | 116962.0 |
| hypothetical protein | B0O44_101113 | Not Available | Positive | 164004 - 165437 | 53094.6 |
| putative alkp superfamily pyrophosphatase or phosphodiesterase | B0O44_101114 | Not Available | Positive | 165443 - 166786 | 48852.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_101115 | Not Available | Negative | 166856 - 167743 | 32280.3 |
| gliding motility-associated-like protein | B0O44_101116 | Not Available | Negative | 167803 - 175041 | 241912.0 |
| bclb c-terminal domain-containing protein | B0O44_101117 | Not Available | Negative | 175071 - 176258 | 39906.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

