Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | B0O44_102246 | Not Available | Negative | 1367074 - 1368207 | 40837.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | B0O44_102247 | Not Available | Negative | 1368243 - 1369214 | 35245.3 |
| argininosuccinate synthase | B0O44_102248 | Not Available | Negative | 1369204 - 1370397 | 44156.7 |
| hypothetical protein | B0O44_102249 | Not Available | Negative | 1370456 - 1371157 | 26550.6 |
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | B0O44_102250 | Not Available | Positive | 1371707 - 1372783 | 39214.1 |
| hypothetical protein | B0O44_102251 | Not Available | Positive | 1372854 - 1373159 | 10816.1 |
| l-ascorbate metabolism protein ulag (beta-lactamase superfamily) | B0O44_102252 | Not Available | Positive | 1373174 - 1373851 | 25081.2 |
| hypothetical protein | B0O44_102253 | Not Available | Negative | 1373924 - 1374286 | 12115.8 |
| dna polymerase i | B0O44_102254 | Not Available | Negative | 1374352 - 1377168 | 104941.0 |
| hypothetical protein | B0O44_102255 | Not Available | Positive | 1377390 - 1378082 | 25008.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

