Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine1402-2'-o)-methyltransferase | B0O44_102236 | Not Available | Negative | 1355445 - 1356158 | 26463.2 |
| hypothetical protein | B0O44_102237 | Not Available | Positive | 1356465 - 1357892 | 54641.6 |
| peptide chain release factor 3 | B0O44_102238 | Not Available | Positive | 1357984 - 1359564 | 60035.7 |
| aspartate aminotransferase | B0O44_102239 | Not Available | Negative | 1359748 - 1361001 | 45493.8 |
| argininosuccinate lyase | B0O44_102240 | Not Available | Negative | 1361028 - 1362359 | 50025.6 |
| acetylornithine deacetylase | B0O44_102241 | Not Available | Negative | 1362448 - 1363515 | 39337.9 |
| pyrroline-5-carboxylate reductase | B0O44_102242 | Not Available | Negative | 1363521 - 1364339 | 28690.9 |
| n-acetylglutamate kinase | B0O44_102243 | Not Available | Negative | 1364342 - 1365130 | 27885.9 |
| proline iminopeptidase | B0O44_102244 | Not Available | Negative | 1365133 - 1366089 | 35748.7 |
| n-succinyl-l-ornithine transcarbamylase | B0O44_102245 | Not Available | Negative | 1366112 - 1367077 | 35884.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

