Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_102215 | Not Available | Positive | 1335863 - 1336003 | 4929.14 |
| thioredoxin-related protein | B0O44_102216 | Not Available | Positive | 1336292 - 1336810 | 19447.3 |
| beta-glucosidase-like glycosyl hydrolase | B0O44_102217 | Not Available | Negative | 1336874 - 1338580 | 62738.1 |
| uncharacterized protein duf4136 | B0O44_102218 | Not Available | Negative | 1338702 - 1339286 | 22484.8 |
| outer membrane protein with beta-barrel domain | B0O44_102219 | Not Available | Positive | 1339646 - 1340260 | 22221.6 |
| cysteine desulfurase | B0O44_102220 | Not Available | Negative | 1340338 - 1341501 | 42266.2 |
| lysophospholipase l1-like esterase | B0O44_102222 | Not Available | Negative | 1341737 - 1342474 | 27701.9 |
| peptidase m28-like protein | B0O44_102223 | Not Available | Positive | 1342587 - 1344149 | 57333.7 |
| putative pyrroloquinoline-quinone binding quinoprotein | B0O44_102224 | Not Available | Negative | 1344201 - 1345604 | 50924.0 |
| histidine kinase/dna gyrase b/hsp90-like atpase | B0O44_102225 | Not Available | Negative | 1345682 - 1347730 | 80479.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

