Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oop family ompa-ompf porin | B0O44_102205 | Not Available | Negative | 1320151 - 1320711 | 20344.4 |
| acetyltransferase (gnat) family protein | B0O44_102206 | Not Available | Negative | 1320829 - 1321281 | 16970.5 |
| uncharacterized protein | B0O44_102207 | Not Available | Positive | 1321339 - 1322916 | 58763.3 |
| lrp/asnc family transcriptional regulator for asna, asnc and gida | B0O44_102208 | Not Available | Positive | 1323456 - 1323929 | 17855.8 |
| pp_01131 | B0O44_102209 | Not Available | Negative | 1323957 - 1325357 | Not Available |
| uncharacterized protein | B0O44_102210 | Not Available | Negative | 1325810 - 1328104 | 84428.6 |
| pyruvate dehydrogenase e1 component beta subunit | B0O44_102211 | Not Available | Negative | 1328183 - 1329169 | 35979.6 |
| hypothetical protein | B0O44_102212 | Not Available | Negative | 1329232 - 1329582 | 13010.4 |
| pd-(d/e)xk nuclease superfamily protein | B0O44_102213 | Not Available | Negative | 1329593 - 1332496 | 110686.0 |
| atp-dependent exodnase (exonuclease v) beta subunit | B0O44_102214 | Not Available | Negative | 1332501 - 1335734 | 122215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

