Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | B0O44_102175 | Not Available | Negative | 1289271 - 1289906 | 23708.1 |
| gliding motility-associated lipoprotein gldd | B0O44_102176 | Not Available | Negative | 1289935 - 1290516 | 22621.1 |
| shikimate dehydrogenase | B0O44_102177 | Not Available | Negative | 1290516 - 1291262 | 27818.3 |
| phosphosulfolactate synthase | B0O44_102178 | Not Available | Negative | 1291314 - 1292081 | 28783.7 |
| tetratricopeptide repeat protein | B0O44_102179 | Not Available | Negative | 1292161 - 1293564 | 55347.7 |
| aldehyde dehydrogenase (nad+) | B0O44_102180 | Not Available | Positive | 1293913 - 1295451 | 55081.1 |
| helicase-like protein | B0O44_102181 | Not Available | Positive | 1295676 - 1298573 | 112140.0 |
| leucyl/phenylalanyl-trna--protein transferase | B0O44_102182 | Not Available | Negative | 1298574 - 1299209 | 23979.0 |
| uncharacterized protein (duf1800 family) | B0O44_102183 | Not Available | Positive | 1299284 - 1300714 | 54422.0 |
| uncharacterized protein (duf1501 family) | B0O44_102184 | Not Available | Positive | 1300735 - 1301934 | 45372.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

