Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyltransferase | B0O44_102165 | Not Available | Positive | 1277612 - 1278754 | 42665.8 |
| hypothetical protein | B0O44_102166 | Not Available | Positive | 1279143 - 1280054 | 34178.0 |
| hamp domain-containing protein | B0O44_102167 | Not Available | Negative | 1280055 - 1283732 | 140754.0 |
| [acyl-carrier-protein] s-malonyltransferase | B0O44_102168 | Not Available | Negative | 1283795 - 1284679 | 31422.1 |
| gtp cyclohydrolase i | B0O44_102169 | Not Available | Negative | 1284946 - 1285581 | 24079.1 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | B0O44_102170 | Not Available | Negative | 1285595 - 1286005 | 15883.8 |
| futalosine hydrolase | B0O44_102171 | Not Available | Positive | 1286079 - 1286717 | 22849.4 |
| 1,4-dihydroxy-6-naphthoate synthase | B0O44_102172 | Not Available | Positive | 1286815 - 1287660 | 31496.2 |
| nlpe-like protein | B0O44_102173 | Not Available | Negative | 1287654 - 1288031 | 13974.9 |
| lipoprotein-releasing system permease protein | B0O44_102174 | Not Available | Negative | 1288034 - 1289260 | 45437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

