Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_102155 | Not Available | Negative | 1260307 - 1263477 | 114648.0 |
| hypothetical protein | B0O44_102156 | Not Available | Positive | 1263483 - 1263641 | 5888.81 |
| hypothetical protein | B0O44_102157 | Not Available | Negative | 1263616 - 1264071 | 16099.6 |
| susd-like starch-binding protein associating with outer membrane | B0O44_102158 | Not Available | Negative | 1264083 - 1265543 | 53059.2 |
| tonb-linked susc/raga family outer membrane protein | B0O44_102159 | Not Available | Negative | 1265553 - 1268597 | 110541.0 |
| uncharacterized protein duf4397 | B0O44_102160 | Not Available | Negative | 1269010 - 1269798 | 28107.8 |
| susd/ragb-like outer membrane lipoprotein | B0O44_102161 | Not Available | Negative | 1269821 - 1271374 | 57094.5 |
| tonb-linked susc/raga family outer membrane protein | B0O44_102162 | Not Available | Negative | 1271386 - 1274472 | 112651.0 |
| deor family transcriptional regulator | B0O44_102163 | Not Available | Positive | 1274699 - 1275445 | 27610.8 |
| glucosamine-6-phosphate deaminase | B0O44_102164 | Not Available | Positive | 1275689 - 1277608 | 72514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

