Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | B0O44_10198 | Not Available | Negative | 139480 - 140097 | 23541.5 |
| imp dehydrogenase | B0O44_10199 | Not Available | Positive | 140845 - 142314 | 52319.5 |
| putative mfs family arabinose efflux permease | B0O44_101100 | Not Available | Positive | 142524 - 143942 | 49441.1 |
| beta-galactosidase | B0O44_101101 | Not Available | Positive | 144140 - 147184 | 116715.0 |
| mechanosensitive ion channel-like protein | B0O44_101102 | Not Available | Positive | 147230 - 149080 | 69615.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_101103 | Not Available | Positive | 149155 - 149766 | 23301.4 |
| fecr family protein | B0O44_101104 | Not Available | Positive | 149847 - 151019 | 43285.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101105 | Not Available | Positive | 151072 - 154410 | 123027.0 |
| putative outer membrane starch-binding protein | B0O44_101106 | Not Available | Positive | 154410 - 155810 | 51401.3 |
| peptidase s51-like protein | B0O44_101107 | Not Available | Positive | 155853 - 156953 | 39523.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

