Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | B0O44_102145 | Not Available | Negative | 1247785 - 1248858 | 40330.1 |
| udp-2,3-diacylglucosamine hydrolase | B0O44_102146 | Not Available | Negative | 1248973 - 1249719 | 29099.7 |
| thioredoxin reductase (nadph) | B0O44_102147 | Not Available | Positive | 1249849 - 1250859 | 36653.3 |
| 2fe-2s ferredoxin | B0O44_102148 | Not Available | Positive | 1250862 - 1251194 | 11929.4 |
| carboxyl-terminal processing protease | B0O44_102149 | Not Available | Negative | 1251191 - 1252879 | 62513.2 |
| hypothetical protein | B0O44_102150 | Not Available | Negative | 1252876 - 1253091 | 8395.13 |
| n-acetylmuramoyl-l-alanine amidase | B0O44_102151 | Not Available | Negative | 1253126 - 1253809 | 26309.9 |
| susd-like starch-binding protein associating with outer membrane | B0O44_102152 | Not Available | Negative | 1253864 - 1255468 | 59094.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_102153 | Not Available | Negative | 1255483 - 1258530 | 109426.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_102154 | Not Available | Negative | 1258894 - 1260201 | 47154.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

