Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family leucine-responsive transcriptional regulator | B0O44_102135 | Not Available | Positive | 1239291 - 1239758 | 17750.8 |
| deor family transcriptional regulator | B0O44_102136 | Not Available | Negative | 1239760 - 1240533 | 27836.9 |
| glycerol-3-phosphate dehydrogenase | B0O44_102137 | Not Available | Positive | 1240780 - 1242363 | 58351.2 |
| glycerol kinase | B0O44_102138 | Not Available | Positive | 1242403 - 1243905 | 55240.2 |
| glycerol uptake facilitator protein | B0O44_102139 | Not Available | Positive | 1243926 - 1244654 | 25332.4 |
| orf6n domain-containing protein | B0O44_102140 | Not Available | Negative | 1244716 - 1245258 | 21024.7 |
| Trna-asp | Not Available | Not Available | Positive | 1245514 - 1245590 | Not Available |
| fr47-like protein | B0O44_102142 | Not Available | Negative | 1245741 - 1246433 | 25770.2 |
| arac-like dna-binding protein | B0O44_102143 | Not Available | Negative | 1246461 - 1247342 | 34051.8 |
| Trna-asp | Not Available | Not Available | Positive | 1247634 - 1247707 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

