Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative esterase | B0O44_10284 | Not Available | Negative | 1188708 - 1189532 | 31049.0 |
| esterase/lipase superfamily enzyme | B0O44_10285 | Not Available | Positive | 1189706 - 1190410 | 27270.2 |
| hypothetical protein | B0O44_10286 | Not Available | Positive | 1190479 - 1191531 | 39536.2 |
| carboxylate-amine ligase | B0O44_10287 | Not Available | Positive | 1191570 - 1192673 | 42437.7 |
| gmp synthase-like glutamine amidotransferase | B0O44_10288 | Not Available | Positive | 1192674 - 1193510 | 31646.6 |
| hypothetical protein | B0O44_10289 | Not Available | Positive | 1193503 - 1194696 | 46317.8 |
| attachment p12 family protein | B0O44_10290 | Not Available | Positive | 1194747 - 1194905 | 5680.09 |
| crp-like camp-binding protein | B0O44_10291 | Not Available | Positive | 1194923 - 1195513 | 22793.7 |
| polyisoprenoid-binding protein ycei | B0O44_10292 | Not Available | Positive | 1195597 - 1196127 | 19391.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | B0O44_10293 | Not Available | Negative | 1196166 - 1196657 | 17853.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

