Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated-like protein | B0O44_10274 | Not Available | Positive | 1172476 - 1176579 | 149038.0 |
| glycosyl transferase family 2 | B0O44_10275 | Not Available | Positive | 1176667 - 1177566 | 34906.7 |
| c-terminal processing protease ctpa/prc | B0O44_10276 | Not Available | Negative | 1177626 - 1180796 | 120256.0 |
| rhomboid protease glup | B0O44_10277 | Not Available | Negative | 1180894 - 1182432 | 58557.0 |
| methyltransferase family protein | B0O44_10278 | Not Available | Negative | 1182435 - 1183184 | 29278.6 |
| putative colanic acid biosynthesis acetyltransferase wcab | B0O44_10279 | Not Available | Negative | 1183213 - 1183734 | 19138.8 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_10280 | Not Available | Positive | 1183839 - 1185107 | 47346.5 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_10281 | Not Available | Positive | 1185104 - 1185862 | 29056.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | B0O44_10282 | Not Available | Negative | 1185923 - 1186639 | 25554.9 |
| gtp-binding protein typa/bipa | B0O44_10283 | Not Available | Negative | 1186790 - 1188598 | 67569.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

