Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_10264 | Not Available | Negative | 1163699 - 1163947 | 9414.77 |
| putative repeat protein (tigr03833 family) | B0O44_10265 | Not Available | Negative | 1164151 - 1164351 | 7299.79 |
| excinuclease abc subunit b | B0O44_10266 | Not Available | Negative | 1164371 - 1166416 | 78237.7 |
| hypothetical protein | B0O44_10267 | Not Available | Positive | 1166484 - 1167590 | 42100.2 |
| uracil phosphoribosyltransferase | B0O44_10268 | Not Available | Positive | 1167645 - 1168289 | 23943.2 |
| putative hydrolase of the had superfamily | B0O44_10269 | Not Available | Positive | 1168302 - 1168991 | 26735.9 |
| uncharacterized protein duf4476 | B0O44_10270 | Not Available | Positive | 1169049 - 1169762 | 27751.0 |
| dinb family protein | B0O44_10271 | Not Available | Positive | 1169767 - 1170279 | 19473.8 |
| o-antigen/teichoic acid export membrane protein | B0O44_10272 | Not Available | Positive | 1170381 - 1171628 | 46036.8 |
| fkbm family methyltransferase | B0O44_10273 | Not Available | Negative | 1171632 - 1172318 | 26475.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

