Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | B0O44_10188 | Not Available | Negative | 126315 - 127181 | 32433.9 |
| ferritin-like protein | B0O44_10189 | Not Available | Positive | 127622 - 128338 | 25673.4 |
| ferritin-like protein | B0O44_10190 | Not Available | Positive | 128356 - 129195 | 29545.4 |
| de-hypoxanthine futalosine cyclase | B0O44_10191 | Not Available | Negative | 129259 - 130383 | 42147.5 |
| putative zn-dependent peptidase | B0O44_10192 | Not Available | Positive | 130484 - 131728 | 47391.5 |
| putative zn-dependent peptidase | B0O44_10193 | Not Available | Positive | 131721 - 132995 | 47775.6 |
| uncharacterized protein duf3857 | B0O44_10194 | Not Available | Negative | 133012 - 134904 | 71848.9 |
| uncharacterized protein duf3858 | B0O44_10195 | Not Available | Negative | 134907 - 136937 | 76900.4 |
| outer membrane protein assembly factor bamb | B0O44_10196 | Not Available | Negative | 137001 - 138860 | 68359.8 |
| acetyltransferase (gnat) family protein | B0O44_10197 | Not Available | Positive | 138967 - 139449 | 18401.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

