Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Pelagicola sp. LXJ1103 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pelagicola sp. LXJ1103
Accession NumberQFAR00000000.1
Gene Summary
Adenine Count
607766 bp
Thymine Count
603262 bp
Guanine Count
942397 bp
Cytosine Count
950305 bp
Genome Length
3103730 bp
Protein-coding Genes
2946 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative transketolase central region-containing protein | DD563_07320 | Not Available | + | 1510308 - 1511675 | 48901.4 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | DD563_07325 | Not Available | + | 1511688 - 1512968 | 44195.5 |
| Serine acetyltransferase | DD563_07330 | Not Available | - | 1513102 - 1513908 | 28837.1 |
| Tail protein | DD563_07335 | Not Available | - | 1514154 - 1518188 | 145542.0 |
| Gta-like protein | DD563_07340 | Not Available | - | 1518188 - 1518634 | 16367.6 |
| Minor tail protein | DD563_07345 | Not Available | - | 1518631 - 1519521 | 32339.1 |
| Tail protein | DD563_07350 | Not Available | - | 1519518 - 1520150 | 23617.6 |
| Putative tail tape measure protein | DD563_07355 | Not Available | - | 1520169 - 1520831 | 22365.8 |
| hypothetical protein | DD563_07360 | Not Available | - | 1520821 - 1521027 | 7520.24 |
| hypothetical protein | DD563_07365 | Not Available | - | 1521024 - 1521344 | 10885.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.